No expression detected in 8/272 cells
[1]
[1]
[1] Mouse vs. Cluster
mouse_4 mouse_5 mouse_8 mouse_9 mouse_1 mouse_7 mouse_6
cluster_1 11 13 26 26 30 29 8
cluster_2 18 19 4 4 54 1 21
Pearson's Chi-squared test with simulated p-value (based on 2000
replicates)
data: mouseTable
X-squared = 72.57, df = NA, p-value = 0.0004998
[1] Differentially expressed genes between clusters for macrophage samples:
[1] CXCL9: 1.316e-45 H2.DMA: 5.851e-21 CD40: 9.441e-19
[4] H2.AA: 4.755e-18 CD74: 5.168e-18 S1PR1: 1.232e-15
[7] LAMP2: 1.875e-13 ITGAX: 1.918e-12 PDL1: 2.181e-12
[10] CXCL10: 1.081e-10 SGPL1: 1.795e-10 CD86: 1.71e-09
[13] CTSD: 1.149e-08 FCGR3: 1.146e-06 TPP1: 2.624e-05
[16] CSF1R: 8.08e-05 CD80: 0.0003996 ITGAM: 0.003352
[19] CCL22: 0.008212 IL1B: 0.008963 VEGF.R3: 0.01685
[1] Differentially expressed genes between mice for macrophage samples:
[1] HIF1A: 1.2e-28 H2.AA: 4.492e-23 CD74: 2.594e-21
[4] CSF1R: 2.809e-16 H2.DMA: 1.363e-14 LAMP2: 3.225e-14
[7] CD14: 1.835e-13 CXCL9: 4.011e-12 CD164: 5.295e-12
[10] ITGAX: 1.4e-09 SGPL1: 4.625e-09 SELENOP: 1.053e-08
[13] S1PR1: 5.271e-08 TPP1: 5.271e-08 CD40: 1.429e-07
[16] SPHK1: 4.889e-06 CCR7: 6.706e-06 CD86: 7.434e-06
[19] PDL1: 7.434e-06 CTSD: 0.0001412 MDK: 0.000263
[22] FCGR3: 0.001091 TLR4: 0.001407 F4.80: 0.002999
[25] HIF2A: 0.01526 CD80: 0.04436